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CECC - Centro de Engenharia e Ciências Computacionais

Processo: 13/08293-7
Modalidade de apoio:Auxílio à Pesquisa - Centros de Pesquisa, Inovação e Difusão - CEPIDs
Vigência: 01 de junho de 2013 - 31 de maio de 2024
Área do conhecimento:Interdisciplinar - Química - Físico-química
Pesquisador responsável:Munir Salomao Skaf
Beneficiário:Munir Salomao Skaf
Instituição Sede: Instituto de Química (IQ). Universidade Estadual de Campinas (UNICAMP). Campinas , SP, Brasil
Pesquisadores principais:
Claudia Maria Bauzer Medeiros ; Douglas Soares Galvão ; Edson Borin ; Euclides de Mesquita Neto ; Guido Costa Souza de Araújo ; Leandro Martinez ; Martin Tygel ; Paulo Sollero ; Renato Pavanello ; Rodolfo Jardim de Azevedo ; William Roberto Wolf
Pesquisadores associados:Alex Antonelli ; Daniel Laria ; Dario Estrin ; Gonçalo Amarante Guimarães Pereira ; Guilherme Pimentel Telles ; Julio Cesar dos Reis ; Marcelo Falsarella Carazzolle ; Martin Schanz ; Maurice de Koning ; Nelson Henrique Morgon ; Peter Jacob Rossky ; Rogério Custodio ; Sandra Eliza Fontes de Avila ; Vera Nisaka Solferini ; Victor Salvador Batista ; Zanoni Dias
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Assunto(s):Modelagem molecular  Biologia computacional  Biofísica  Geofísica  e-Science 
Palavra(s)-Chave do Pesquisador:Biofísico-química computacional | bioinformática | Engenharia mecânica computacional | e-science | Geofisica Computacional | Modelagem molecular | computação intensiva em engenharia e ciências moleculares
Publicação FAPESP:https://media.fapesp.br/bv/uploads/pdfs/Multidisciplinary_science_RWosAEh_32_33.pdf

Resumo

Propõe-se a criação de um centro multidisciplinar de alto nível, dedicado ao desenvolvimento e aplicação de métodos computacionais avançados e que venha solucionar problemas de fronteira nas ciências e engenharias, bem como promover avanços substantivos em inovação tecnológica e difusão desta área do conhecimento, a qual tem sido denominada e-Science. O "Centro de Engenharia e Ciências Computacionais" (CECC) deverá ser sediado na Universidade Estadual de Campinas em prédio próprio, que inclui um auditório para 160 pessoas, salas, e ambientes adequados para abrigar equipamentos computacionais, a ser construído com recursos provenientes de um projeto recém-aprovado na chamada CT-Infra da FINEP, complementados por recursos da Universidade, totalizando R$ 6.634.400,00. O Centro congrega pesquisadores de elevado nível científico dos Institutos de Biologia, Computação, Física, Matemática, Química e Engenharia Mecânica da Unicamp, e tem a modelagem computacional de alto desempenho como agente unificador de sua temática e foco científico. A proposta conta também com a participação de cinco pesquisadores de renome das Universidades do Texas e Yale, nos Estados Unidos, Universidade de Graz, na Áustria, e da Universidade de Buenos Aires, Argentina. O Centro constituirá um ambiente unificado de excelência, pioneiro no Brasil, visando multiplicar as competências atuais na área de simulação e modelagem computacional e a promoção efetiva da interação entre seus integrantes para a solução de novos desafios científicos em temas como nanomateriais, sistemas biomoleculares de interesse à saúde humana e bioenergia, bioinformática, sistemas particulados e semi-particulados, meios porosos, meios contínuos, e geofísica computacional, pelos quais permeia o desenvolvimento de técnicas avançadas de processamento paralelo e arquiteturas multi-core. O Centro deverá atuar estimulando e criando condições para a interação com setores produtivos. a geração de inovação e a difusão do conhecimento através de seus núcleos de Transferência e Inovação Tecnológica e de Difusão e Educação. (AU)

Matéria(s) publicada(s) na Revista Pesquisa FAPESP sobre o auxílio::
Frío por un hilo 
Frío por un hilo 
El planeta plástico 
El planeta plástico 
Un filtro distinto 
Un filtro distinto 
Sólidos bien maleables 
Sólidos bem maleáveis 
Matéria(s) publicada(s) no Pesquisa para Inovação FAPESP sobre o auxílio:
Voo de coruja inspira indústria aeronáutica a projetar aviões mais silenciosos 
Matéria(s) publicada(s) na Agência FAPESP sobre o auxílio:
TITULO 
Matéria(s) publicada(s) em Outras Mídias (0 total):
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VEICULO: TITULO (DATA)
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Publicações científicas (393)
(Referências obtidas automaticamente do Web of Science e do SciELO, por meio da informação sobre o financiamento pela FAPESP e o número do processo correspondente, incluída na publicação pelos autores)
FRANCO PINHEIRO MOREIRA, PEDRO AUGUSTO; DE KONING, MAURICE. Nuclear quantum fluctuations in ice I-h. Physical Chemistry Chemical Physics, v. 17, n. 38, p. 24716-24721, . (13/08293-7)
ROMERO ROCHA, CARLOS MURILO; PEREIRA, DOUGLAS HENRIQUE; MORGON, NELSON HENRIQUE; CUSTODIO, ROGERIO. Assessment of G3(MP2)//B3 theory including a pseudopotential for molecules containing first-, second-, and third-row representative elements. Journal of Chemical Physics, v. 139, n. 18, . (13/08293-7)
CAJAHUARINGA, SAMUEL; DE KONING, MAURICE; ANTONELLI, ALEX. Revisiting dynamics near a liquid-liquid phase transition in Si and Ga: The fragile-to-strong transition. Journal of Chemical Physics, v. 139, n. 22, . (13/08293-7)
TIM, CARLA ROBERTA; BOSSINI, PAULO SERGIO; KIDO, HUELITON WILIAN; MALAVAZI, IRAN; VON ZESKA KRESS, MARCIA REGINA; CARAZZOLLE, MARCELO FALSARELLA; PARIZOTTO, NIVALDO ANTONIO; RENN, ANA CLAUDIA. Effects of low-level laser therapy on the expression of osteogenic genes during the initial stages of bone healing in rats: a microarray analysis. Lasers in Medical Science, v. 30, n. 9, p. 2325-2333, . (13/08293-7, 10/15335-0)
MOTTIN, MELINA; SOUZA, PAULO C. T.; RICCI, CLARISSE G.; SKAF, MUNIR S.. CHARMM Force Field Parameterization of Peroxisome Proliferator-Activated Receptor gamma Ligands. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, v. 18, n. 1, . (12/24750-6, 11/22735-7, 13/08293-7)
CHIPARA, ALIN CRISTIAN; OWUOR, PETER SAMORA; BHOWMICK, SANJIT; BRUNETTO, GUSTAVO; ASIF, S. A. SYED; CHIPARA, MIRCEA; VAJTAI, ROBERT; LOU, JUN; GALVAO, DOUGLAS S.; TIWARY, CHANDRA SEKHAR; et al. Structural Reinforcement through Liquid Encapsulation. ADVANCED MATERIALS INTERFACES, v. 4, n. 2, . (13/08293-7)
DE OLIVEIRA, ALBERTO A.; FERRARA, PASQUALE; DE ROSA, ALESSIA; PIVA, ALESSANDRO; BARNI, MAURO; GOLDENSTEIN, SIOME; DIAS, ZANONI; ROCHA, ANDERSON. Multiple Parenting Phylogeny Relationships in Digital Images. IEEE Transactions on Information Forensics and Security, v. 11, n. 2, p. 328-343, . (13/08293-7, 11/22749-8, 13/21251-1, 10/05647-4)
DE SOUSA, J. M.; BRUNETTO, G.; COLUCI, V. R.; GALVAO, D. S.. Torsional ``superplasticity{''} of graphyne nanotubes. Carbon, v. 96, p. 14-19, . (13/08293-7)
BAUDET, CHRISTIAN; DIAS, ULISSES; DIAS, ZANONI. Sorting by weighted inversions considering length and symmetry. BMC Bioinformatics, v. 16, n. 19, . (13/08293-7, 14/19401-8, 12/01584-3)
OZDEN, SEHMUS; AUTRETO, PEDRO A. S.; TIWARY, CHANDRA SEKHAR; KHATIWADA, SUMAN; MACHADO, LEONARDO; GALVAO, DOUGLAS S.; VAJTAI, ROBERT; BARRERA, ENRIQUE V.; AJAYAN, PULICKEL M.. Unzipping Carbon Nanotubes at High Impact. Nano Letters, v. 14, n. 7, p. 4131-4137, . (13/08293-7)
GALVAO, GUSTAVO RODRIGUES; LEE, ORLANDO; DIAS, ZANONI. Sorting signed permutations by short operations. Algorithms for Molecular Biology, v. 10, . (13/08293-7, 14/04718-6)
LAGOS, M. J.; AUTRETO, P. A. S.; BETTINI, J.; SATO, F.; DANTAS, S. O.; GALVAO, D. S.; UGARTE, D.. Surface effects on the mechanical elongation of AuCu nanowires: De-alloying and the formation of mixed suspended atomic chains. Journal of Applied Physics, v. 117, n. 9, . (13/08293-7)
YUYAMA, PRISCILA MARY; REIS JUNIOR, OSVALDO; IVAMOTO, SUZANA TIEMI; DOMINGUES, DOUGLAS SILVA; CARAZZOLLE, MARCELO FALSARELLA; GUIMARAES PEREIRA, GONCALO AMARANTE; CHARMETANT, PIERRE; LEROY, THIERRY; PROTASIO PEREIRA, LUIZ FILIPE. Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes in leaves and fruits. Molecular Genetics and Genomics, v. 291, n. 1, p. 323-336, . (13/08293-7)
BOTARI, TIAGO; PAUPITZ, RICARDO; DA SILVA AUTRETO, PEDRO ALVES; GALVAO, DOUGLAS S.. Graphene healing mechanisms: A theoretical investigation. Carbon, v. 99, p. 302-309, . (13/08293-7, 14/15521-9)
VICENTE, W. M.; ZUO, Z. H.; PAVANELLO, R.; CALIXTO, T. K. L.; PICELLI, R.; XIE, Y. M.. Concurrent topology optimization for minimizing frequency responses of two-level hierarchical structures. COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, v. 301, p. 116-136, . (13/08293-7, 11/09730-6, 13/20022-9)
JARA, GABRIEL E.; MARTINEZ, LEANDRO. Anthrax Edema Factor: An Ion-Adaptive Mechanism of Catalysis with Increased Transition-State Conformational Flexibility. Journal of Physical Chemistry B, v. 120, n. 27, p. 6504-6514, . (13/08293-7, 13/05475-7, 13/22360-9, 10/16947-9)
HUANG, WEILIN; WANG, RUNQIU; CHEN, YANGKANG; LI, HUIJIAN; GAN, SHUWEI. Damped multichannel singular spectrum analysis for 3D random noise attenuation. GEOPHYSICS, v. 81, n. 4, p. V261-V282, . (13/08293-7)
PEREIRA, JORGE F.; ARAUJO, ELZA F.; BROMMONSCHENKEL, SERGIO H.; QUEIROZ, CASLEY B.; COSTA, GUSTAVO G. L.; CARAZZOLLE, MARCELO F.; PEREIRA, GONCALO A. G.; QUEIROZ, MARISA V.. MpSaci is a widespread gypsy-Ty3 retrotransposon highly represented by non-autonomous copies in the Moniliophthora perniciosa genome. CURRENT GENETICS, v. 61, n. 2, p. 185-202, . (13/08293-7)
ANDRADE, N. F.; AGUIAR, A. L.; KIM, Y. A.; ENDO, M.; FREIRE, P. T. C.; BRUNETTO, G.; GALVAO, D. S.; DRESSELHAUS, M. S.; SOUZA FILHO, A. G.. Linear Carbon Chains under High-Pressure Conditions. Journal of Physical Chemistry C, v. 119, n. 19, p. 10669-10676, . (13/08293-7)
CANO-MARQUEZ, ABRAHAM G.; SCHMIDT, WESLLER G.; RIBEIRO-SOARES, JENAINA; CANCADO, LUIZ GUSTAVO; RODRIGUES, WAGNER N.; SANTOS, ADELINA P.; FURTADO, CLASCIDIA A.; AUTRETO, PEDRO A. S.; PAUPITZ, RICARDO; GALVAO, DOUGLAS S.; et al. Enhanced Mechanical Stability of Gold Nanotips through Carbon Nanocone Encapsulation. SCIENTIFIC REPORTS, v. 5, . (13/08293-7, 11/17253-3, 13/09536-0)
RICCI, CLARISSE G.; SILVEIRA, RODRIGO L.; RIVALTA, IVAN; BATISTA, VICTOR S.; SKAF, MUNIR S.. Allosteric Pathways in the PPAR gamma-RXR alpha nuclear receptor complex. SCIENTIFIC REPORTS, v. 6, . (13/08293-7)
PEREIRA, DOUGLAS HENRIQUE; DUCATI, LUCAS COLUCCI; RITTNER, ROBERTO; CUSTODIO, ROGERIO. A study of the rotational barriers for some organic compounds using the G3 and G3CEP theories. Journal of Molecular Modeling, v. 20, n. 4, . (13/08293-7)
MARONEZE, CAMILA M.; RAHIM, ABDUR; FATTORI, NATALIA; DA COSTA, LUIZ P.; SIGOLI, FERNANDO A.; MAZALI, ITALO O.; CUSTODIO, ROGERIO; GUSHIKEM, YOSHITAKA. Electroactive Properties of 1-propyl-3-methylimidazolium Ionic Liquid Covalently Bonded on Mesoporous Silica Surface: Development of an Electrochemical Sensor Probed for NADH, Dopamine and Uric Acid Detection. Electrochimica Acta, v. 123, p. 435-440, . (13/08293-7)
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LEITE, RODOLFO PAULA; FREITAS, RODRIGO; AZEVEDO, RODOLFO; DE KONING, MAURICE. The Uhlenbeck-Ford model: Exact virial coefficients and application as a reference system in fluid-phase free-energy calculations. Journal of Chemical Physics, v. 145, n. 19, . (13/08293-7)
OZDEN, SEHMUS; MACHADO, LEONARDO D.; TIWARY, CHANDRASEKHAR; AUTRETO, PEDRO A. S.; VAJTAI, ROBERT; BARRERA, ENRIQUE V.; GALVAO, DOUGLAS S.; AJAYAN, PULICKEL M.. Ballistic Fracturing of Carbon Nanotubes. ACS APPLIED MATERIALS & INTERFACES, v. 8, n. 37, p. 24819-24825, . (13/08293-7)
VINOD, SOUMYA; TIWARY, CHANDRA SEKHAR; MACHADO, LEONARDO D.; OZDEN, SEHMUS; VAJTAI, ROBERT; GALVAO, DOUGLAS S.; AJAYAN, PULICKEL M.. Synthesis of ultralow density 3D graphene-CNT foams using a two-step method. NANOSCALE, v. 8, n. 35, p. 15857-15863, . (13/08293-7)
ROMERO ROCHA, CARLOS MURILO; ROSARIO RODRIGUES, JOSE AUGUSTO; SAMENHO MORAN, PAULO JOSE; CUSTODIO, ROGERIO. An interpretation of the phenol nitration mechanism in the gas phase using G3(MP2)//B3-CEP theory. Journal of Molecular Modeling, v. 20, n. 12, . (13/08293-7)
SANTOS-FLOREZ, PEDRO ANTONIO; RUESTES, CARLOS J.; DE KONING, MAURICE. Atomistic Simulation of Nanoindentation of Ice I-h. Journal of Physical Chemistry C, v. 124, n. 17, p. 9329-9336, . (16/23891-6, 13/08293-7)
OLIVEIRA, ELIEZER F.; MACHADO, LEONARDO D.; BAUGHMAN, RAY H.; GALVAO, DOUGLAS S.. Zeolite-templated Carbon Network: A Beta Zeolite Case Study. MRS ADVANCES, v. 5, n. 14-15, SI, p. 751-756, . (13/08293-7, 16/18499-0, 19/07157-9)
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WOELLNER, CRISTIANO F.; BOTARI, TIAGO; PERIM, ERIC; GALVAO, DOUGLAS S.. Mechanical Properties of Schwarzites - A Fully Atomistic Reactive Molecular Dynamics Investigation. MRS ADVANCES, v. 3, n. 8-9, p. 448-453, . (14/24547-1, 13/08293-7)
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BORGES, DAIANE DAMASCENO; WOELLNER, CRISTIANO F.; AUTRETO, PEDRO A. S.; GALVAO, DOUGLAS S.. Water/Alcohol Separation in Graphene Oxide Membranes: Insights from Molecular Dynamics and Monte Carlo Simulations. MRS ADVANCES, v. 3, n. 1-2, p. 109-114, . (13/08293-7, 16/12340-9, 15/14703-9)
BORGES, DAIANE DAMASCENO; GALVAO, DOUGLAS S.. Schwarzites for Natural Gas Storage: A Grand - Canonical Monte Carlo Study. MRS ADVANCES, v. 3, n. 1-2, p. 115-120, . (13/08293-7, 15/14703-9)
SILVA, CLEUTON DE SOUZA; CUSTODIO, ROGERIO. Assessment of pK(a) Determination for Monocarboxylic Acids with an Accurate Theoretical Composite Method: G4CEP. Journal of Physical Chemistry A, v. 123, n. 38, p. 8314-8320, . (13/08293-7, 17/11485-6)
JAQUES, YGOR MORAIS; GALVAO, DOUGLAS SOARES. Spreading patterns of high velocity nanodroplets impacting on suspended graphene. JOURNAL OF MOLECULAR LIQUIDS, v. 292, . (13/24500-2, 13/08293-7)
CAMPOS DE OLIVEIRA, FABIOLA MARTINS; BONIN, EDSON. Partitioning Convolutional Neural Networks to Maximize the Inference Rate on Constrained IoT Devices. FUTURE INTERNET, v. 11, n. 10, . (13/08293-7)
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TROMER, RAPHAEL M.; FELIX, LEVI C.; WOELLNER, CRISTIANO F.; GALVAO, DOUGLAS S.. A DFT investigation of the electronic, optical, and thermoelectric properties of pentadiamond. Chemical Physics Letters, v. 763, . (13/08293-7)
CHAVES, ANDERSON S.; GONZALEZ-ROMERO, ROBERT LUIS; MELENDEZ, JUAN J.; ANTONELLI, ALEX. Investigating charge carrier scattering processes in anisotropic semiconductors through first-principles calculations: the case of p-type SnSe. Physical Chemistry Chemical Physics, v. 23, n. 2, p. 900-913, . (15/26434-2, 16/23891-6, 17/26105-4, 13/08293-7, 19/26088-8, 10/16970-0)
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LABAKI, JOSUE; BARROS, PERSIO L. A.; MESQUITA, EUCLIDES. A model of the time-harmonic torsional response of piled plates using an IBEM-FEM coupling. Engineering Analysis with Boundary Elements, v. 125, p. 241-249, . (13/08293-7)
CARLOS, THAYRINE DIAS; BEZERRA, LEYDIANE BARBOSA; VIEIRA, MAYANE MARQUES; SARMENTO, RENATO ALMEIDA; PEREIRA, DOUGLAS HENRIQUE; CAVALLINI, GRASIELE SOARES. Fenton-type process using peracetic acid: Efficiency, reaction elucidations and ecotoxicity. JOURNAL OF HAZARDOUS MATERIALS, v. 403, . (13/08293-7, 17/11485-6)
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MORGON, NELSON H.; DE SOUZA, AGUINALDO R.. 8(19) molecular knot: a theoretical analysis of the electronic structure using an ONIOM approach. Journal of Molecular Modeling, v. 27, n. 2, . (13/08293-7)
LOPES, HEITOR NIGRO; MAHFOUD, JARIR; PAVANELLO, RENATO. High natural frequency gap topology optimization of bi-material elastic structures and band gap analysis. STRUCTURAL AND MULTIDISCIPLINARY OPTIMIZATION, v. 63, n. 5, . (19/05393-7, 13/08293-7)
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DE AGUIAR FILHO, SILVIO QUINTINO; DOS SANTOS PEREIRA, ANNA KARLA; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Theoretical study of glyphosate adsorption potential on methylcellulose and cellulose xanthate matrices compared to activated carbon: role of biopolymers in the adsorption process. POLYMER BULLETIN, . (13/08293-7, 17/11485-6)
CRESSWELL, ROSALIE; DUPREE, RAY; BROWN, STEVEN P.; PEREIRA, CAROLINE S.; SKAF, MUNIR S.; SORIEUL, MATHIAS; DUPREE, PAUL; HILL, STEFAN. Importance of Water in Maintaining Softwood Secondary Cell Wall Nanostructure. Biomacromolecules, v. 22, n. 11, p. 4669-4680, . (13/08293-7, 15/25031-1)
ALEXANDRINO, ALEXSANDRO OLIVEIRA; OLIVEIRA, ANDRE RODRIGUES; DIAS, ULISSES; DIAS, ZANONI. Labeled Cycle Graph for Transposition and Indel Distance. JOURNAL OF COMPUTATIONAL BIOLOGY, . (17/12646-3, 13/08293-7, 15/11937-9, 19/27331-3)
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ALVAREZ-DONADO, RENE; CAJAHUARINGA, SAMUEL; ANTONELLI, ALEX. Revisiting the fragile-to-strong crossover in metallic glass-forming liquids: Application to CuxZrxAl100-2x alloy. PHYSICAL REVIEW MATERIALS, v. 3, n. 8, . (10/16970-0, 16/23891-6, 13/08293-7)
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PORTO, CAIO M.; MORGON, NELSON H.. Analytical approach for the tunneling process in double well potentials using IRC calculations. COMPUTATIONAL AND THEORETICAL CHEMISTRY, v. 1187, . (13/08293-7)
ORENHA, RENATO PEREIRA; MORGON, NELSON HENRIQUE; CONTRERAS-GARCIA, JULIA; SILVA, GRAZIELE CAPPATO GUERRA; NAGURNIAK, GLAUCIO REGIS; PIOTROWSKI, MAURICIO JEOMAR; CARAMORI, GIOVANNI FINOTO; MUNOZ-CASTRO, ALVARO; PARREIRA, RENATO LUIS TAME. How does the acidic milieu interfere in the capability of ruthenium nitrosyl complexes to release nitric oxide?. NEW JOURNAL OF CHEMISTRY, v. 44, n. 3, p. 773-779, . (11/07623-8, 19/00543-0, 17/24856-2, 13/08293-7)

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