Advanced search
Start date
Betweenand


Metagenomic insights into the plasma virome of Brazilian patients with prostate cancer

Full text
Author(s):
Show less -
Zanette, Dalila Luciola ; Coelho, Karoline Brito Caetano Andrade ; de Carvalho, Eneas ; Aoki, Mateus Nobrega ; Nardin, Jeanine Marie ; Lalli, Larissa Araujo ; Bezerra, Rafael dos Santos ; Giovanetti, Marta ; Zucherato, Victoria Simionatto ; de Campos, Gabriel Montenegro ; Bernardino, Jardelina de Souza Todao ; Viala, Vincent Louis ; Ciccozzi, Massimo ; Alcantara, Luiz Carlos Junior ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina ; Kashima, Simone ; Covas, Dimas Tadeu ; Slavov, Svetoslav Nanev
Total Authors: 19
Document type: Journal article
Source: MOLECULAR & CELLULAR ONCOLOGY; v. 10, n. 1, p. 9-pg., 2023-12-31.
Abstract

Growing evidence suggests that metavirome changes could be associated increased risk for malignant cell transformation. Considering Viruses have been proposed as factors for prostate cancer induction. The objective of this study was to examine the composition of the plasma metavirome of patients with prostate cancer. Blood samples were obtained from 49 male patients with primary prostate adenocarcinoma. Thirty blood donors were included as a control group. The obtained next-generation sequencing data were analyzed using a bioinformatic pipeline for virus metagenomics. Viral reads with higher abundance were assembled in contigs and analyzed taxonomically. Viral agents of interest were also confirmed by qPCR. Anelloviruses and the Human Pegivirus-1 (HPgV-1) were the most abundant component of plasma metavirome. Clinically important viruses like hepatitis C virus (HCV), cytomegalovirus and human adenovirus type C were also identified. In comparison, the blood donor virome was exclusively composed of torque teno virus types (TTV) types. The performed HPgV-1 and HCV phylogeny revealed that these viruses belong to commonly detected in Brazil genotypes. Our study sheds light on the plasma viral abundance in patients with prostatic cancer. The obtained viral diversity allowed us to separate the patients and controls, probably suggesting that malignant processes may influence virome composition. More complex and multiple approach investigations are necessary to examine the likely causal relationship between metavirome and its nvolvement in prostate cancer. (AU)

FAPESP's process: 19/08528-0 - Application of bioinformatic procedures for identification of the impact of the viral infections in hemotherapy
Grantee:Rafael dos Santos Bezerra
Support Opportunities: Scholarships in Brazil - Master
FAPESP's process: 22/00910-6 - Development and application of bioinformatic pipelines for metagenomic analysis of clinical samples
Grantee:Gabriel Montenegro de Campos
Support Opportunities: Scholarships in Brazil - Scientific Initiation
FAPESP's process: 17/23205-8 - Evaluation of the impact of emerging and reemerging viruses in the field of hemotherapy and stem cell transplantation by multiple-research approach
Grantee:Svetoslav Nanev Slavov
Support Opportunities: Research Grants - Young Investigators Grants
FAPESP's process: 20/13194-1 - Evaluation of the prevalence and application of next generation sequencing methods for identification of emerging viruses in the area of hemotherapy
Grantee:Victória Simionatto Zucherato
Support Opportunities: Scholarships in Brazil - Technical Training Program - Technical Training