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João Marcelo Pereira Alves

CV Lattes ResearcherID ORCID


Universidade de São Paulo (USP). Instituto de Ciências Biomédicas (ICB)  (Institutional affiliation for the last research proposal)
Birthplace: Brazil

PhD in Biology of Host-Pathogen Relationship from University of São Paulo (2001) and formerly a post-doctoral fellow at the Dept. of Microbiology and Immunology at Virginia Commonwealth University. Research focusing on structural, functional, and evolutionary aspects of bacteria and parasitic protozoa. Main interests include bioinformatics and molecular biology, in particular evolution and genomics. Working mainly on: phylogeny, assembly, analysis and annotation of genomes and transcriptomes (using "next generation" high-throughput methodologies), gene expression analysis (RNA-Seq), use of relational databases for management and presentation of biological data, and computer programming for the analysis of biological data. (Source: Lattes Curriculum)

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FAPESP support in numbers * Updated January 15, 2022
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Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (13)
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

SILVA, FLAVIA M.; KOSTYGOV, ALEXEI Y.; SPODAREVA, VIKTORIA V.; BUTENKO, ANZHELIKA; TOSSOU, REGIS; LUKES, JULIUS; YURCHENKO, VYACHESLAV; ALVES, JOAO M. P.. The reduced genome of Candidatus Kinetoplastibacterium sorsogonicusi, the endosymbiont of Kentomonas sorsogonicus (Trypanosomatidae): loss of the haem-synthesis pathway. Parasitology, v. 145, n. 10, SI, p. 1287-1293, . Web of Science Citations: 5. (13/14622-3)

BRADWELL, KATIE R.; KOPARDE, VISHAL N.; MATVEYEV, ANDREY V.; SERRANO, MYRNA G.; ALVES, JOAO M. P.; PARIKH, HARDIK; HUANG, BERNICE; LEE, VLADIMIR; ESPINOSA-ALVAREZ, ONEIDA; ORTIZ, PAOLA A.; et al. Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence. BMC Genomics, v. 19, . Web of Science Citations: 1. (13/14622-3)

SAO PEDRO, SIMONE LIMA; PEREIRA ALVES, JOAO MARCELO; BARRETO, ANDRE SILVA; DE SOUZA LIMA, ANDRE OLIVEIRA. Evidence of Positive Selection of Aquaporins Genes from Pontoporia blainvillei during the Evolutionary Process of Cetaceans. PLoS One, v. 10, n. 7, . Web of Science Citations: 0. (13/14622-3)

ROMULO AGUILAR-GAMBOA, FRANKLIN; ALBERTO SALCEDO-MEJIA, LUIS; MIGUEL SERQUEN-LOPEZ, LUIS; MECHAN-LLONTOP, MARCO ENRIQUE; OMAR TULLUME-VERGARA, PERCY; BONIFACIO-BRICENO, JUAN JOSE; SALAS-ASENCIOS, RAMSES; SILVA DIAZ, HEBER; CARDENAS, JUAN P.. Genomic Sequences and Analysis of Five SARS-CoV-2 Variants Obtained from Patients in Lambayeque, Peru. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, v. 10, n. 1, . Web of Science Citations: 0. (18/01284-6)

GABRIEL, HELOISA B.; DE AZEVEDO, MAURO F.; PALMISANO, GIUSEPPE; WUNDERLICH, GERHARD; KIMURA, EMILIA A.; KATZIN, ALEJANDRO M.; ALVES, JOAO M. P.. Single-target high-throughput transcription analyses reveal high levels of alternative splicing present in the FPPS/GGPPS from Plasmodium falciparum. SCIENTIFIC REPORTS, v. 5, . (13/14622-3, 10/19518-1, 14/23417-7)

ALVES, JOAO M. P.; DE OLIVEIRA, ANDRE L.; SANDBERG, TATIANA O. M.; MORENO-GALLEGO, JAIME L.; DE TOLEDO, MARCELO A. F.; DE MOURA, ELISABETH M. M.; OLIVEIRA, LILANE S.; DURHAM, ALAN M.; MEHNERT, DOLORES U.; ZANOTTO, PAOLO M. DE A.; et al. GenSeed-HMM: A Tool for Progressive Assembly Using Profile HMMs as Seeds and its Application in Alpavirinae Viral Discovery from Metagenomic Data. FRONTIERS IN MICROBIOLOGY, v. 7, . (13/14622-3, 10/04609-1)

DE AZEVEDO-MARTINS, ALLAN C.; ALVES, JOAO M. P.; DE MELLO, FERNANDO GARCIA; VASCONCELOS, ANA TEREZA R.; DE SOUZA, WANDERLEY; EINICKER-LAMAS, MARCELO; MOTTA, MARIA CRISTINA M.. Biochemical and phylogenetic analyses of phosphatidylinositol production in Angomonas deanei, an endosymbiont-harboring trypanosomatid. PARASITES & VECTORS, v. 8, . (13/14622-3)

CABALLERO, ZULEIMA C.; COSTA-MARTINS, ANDRE G.; FERREIRA, ROBSON C.; ALVES, JOAO M. P.; SERRANO, MYRNA G.; CAMARGO, ERNEY P.; BUCK, GREGORY A.; MINOPRIO, PAOLA; TEIXEIRA, MARTA M. G.. Phylogenetic and syntenic data support a single horizontal transference to a Trypanosoma ancestor of a prokaryotic proline racemase implicated in parasite evasion from host defences. PARASITES & VECTORS, v. 8, . (13/14622-3)

GUIMARAES, LILIAN O.; WUNDERLICH, GERHARD; ALVES, JOAO M. P.; BUENO, MARINA G.; ROEHE, FABIO; CATAO-DIAS, JOSE L.; NEVES, AMANDA; MALAFRONTE, ROSELY S.; CURADO, IZILDA; DOMINGUES, WILSON; et al. Merozoite surface protein-1 genetic diversity in Plasmodium malariae and Plasmodium brasilianum from Brazil. BMC INFECTIOUS DISEASES, v. 15, . (13/14622-3)

MATVEYEV, ANDREY V.; ALVES, JOAO M. P.; SERRANO, MYRNA G.; LEE, VLADIMIR; LARA, ANA M.; BARTON, WILLIAM A.; COSTA-MARTINS, ANDRE G.; BEVERLEY, STEPHEN M.; CAMARGO, ERNEY P.; TEIXEIRA, MARTA M. G.; et al. The Evolutionary Loss of RNAi Key Determinants in Kinetoplastids as a Multiple Sporadic Phenomenon. Journal of Molecular Evolution, v. 84, n. 2-3, p. 104-115, . (13/14622-3)

MATVEYEV, ANDREY V.; ALVES, JOAO M. P.; SERRANO, MYRNA G.; LEE, VLADIMIR; LARA, ANA M.; BARTON, WILLIAM A.; COSTA-MARTINS, ANDRE G.; BEVERLEY, STEPHEN M.; CAMARGO, ERNEY P.; TEIXEIRA, MARTA M. G.; et al. The Evolutionary Loss of RNAi Key Determinants in Kinetoplastids as a Multiple Sporadic Phenomenon. Journal of Molecular Evolution, v. 84, n. 2-3, p. 104-115, . (13/14622-3)

SKALICKY, TOMAS; ALVES, JOAO M. P.; MORAIS, ANDERSON C.; REZNAROVA, JANA; BUTENKO, ANZHELIKA; LUKES, JULIUS; SERRANO, MYRNA G.; BUCK, GREGORY A.; TEIXEIRA, MARTA M. G.; CAMARGO, ERNEY P.; et al. Endosymbiont Capture, a Repeated Process of Endosymbiont Transfer with Replacement in Trypanosomatids Angomonas spp.. PATHOGENS, v. 10, n. 6, . (16/07487-0, 13/14622-3)

PETERSEN, VIVIAN; SANTANA, MICAEL; ALVES, J. MARCELO P.; SUESDEK, LINCOLN. Genetic and morphological polymorphisms of Aedes scapularis (Diptera: Culicidae), vector of filariae and arboviruses. INFECTION GENETICS AND EVOLUTION, v. 97, . (13/14622-3)

Academic Publications

(References retrieved automatically from State of São Paulo Research Institutions)

ALVES, João Marcelo Pereira. Caracterização e filogenia moleculares de Acanthamoeba.. Tese (Doutorado) -  Instituto de Ciências Biomédicas.  Universidade de São Paulo (USP).  São Paulo.  (97/14235-5

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